STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1007PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: mem:Memar_1977 protein of unknown function DUF21. (422 aa)    
Predicted Functional Partners:
Nmar_1008
D-alanine--D-alanine ligase; PFAM: peptidase M20; protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; RimK domain protein ATP-grasp; KEGG: amt:Amet_3744 D-alanine--D-alanine ligase domain protein.
     
 0.794
Nmar_1003
PFAM: N-formylglutamate amidohydrolase; KEGG: mem:Memar_1317 N-formylglutamate amidohydrolase.
 
     0.787
Nmar_1004
Gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: amt:Amet_3745 gamma-glutamyltransferase.
 
     0.787
corA
Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
  
    0.786
Nmar_1005
PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: det:DET0408 cation channel family protein.
       0.773
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.697
Nmar_0764
PFAM: CBS domain containing protein; cation transporter; KEGG: smu:SMU.1709 putative potassium uptake protein TrkH.
 
  
 0.471
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.