STRINGSTRING
Nmar_1024 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1024" - PFAM: heat shock protein DnaJ domain protein in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1024PFAM- heat shock protein DnaJ domain protein; KEGG- cfa-609460 DnaJ (Hsp40) homolog, subfamily B, member 8 (223 aa)    
Predicted Functional Partners:
dnaK
Chaperone protein DnaK; Acts as a chaperone (636 aa)
 
 
  0.969
Nmar_0672
TIGRFAM- thioredoxin reductase; PFAM- FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG- tfu-Tfu_3108 thioredoxin reductase (334 aa)
         
  0.891
Nmar_0498
TIGRFAM- SUF system FeS assembly protein, NifU family; PFAM- nitrogen-fixing NifU domain protein; KEGG- rrs-RoseRS_0711 SUF system FeS assembly protein, NifU family (147 aa)
   
   
  0.883
Nmar_1785
PFAM- FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG- afw-Anae109_2804 FAD-dependent pyridine nucleotide-disulphide oxidoreductase (382 aa)
   
   
  0.862
Nmar_0095
Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- dependent [...] (187 aa)
 
 
  0.841
Nmar_1022
PFAM- Cupin 2 conserved barrel domain protein; KEGG- tma-TM1010 hypothetical protein (151 aa)
         
  0.819
Nmar_0831
Glyceraldehyde-3-phosphate dehydrogenase (NAD(P)(+)) (Phosphorylating); PFAM- glyceraldehyde 3-phosphate dehydrogenase; KEGG- hal-VNG0095G glyceraldehyde 3-phosphate dehydrogenase (350 aa)
           
  0.692
Nmar_1023
PFAM- Cupin 2 conserved barrel domain protein; KEGG- ava-Ava_C0104 cupin (120 aa)
         
  0.673
Nmar_1008
D-alanine--D-alanine ligase; PFAM- peptidase M20; protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; RimK domain protein ATP-grasp; KEGG- amt-Amet_3744 D-alanine--D-alanine ligase domain protein (743 aa)
   
 
  0.665
Nmar_1765
PFAM- 4Fe-4S ferredoxin iron-sulfur binding domain protein (99 aa)
         
  0.658
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (11%) [HD]