STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1233Protein of unknown function DUF359; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA). (154 aa)    
Predicted Functional Partners:
Nmar_1234
Protein of unknown function DUF59; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
       0.960
Nmar_1494
TIGRFAM: cytidyltransferase-related domain; PFAM: cytidylyltransferase; KEGG: mtp:Mthe_0790 cytidyltransferase-related domain.
  
  
 0.931
Nmar_0138
PFAM: 4'-phosphopantetheinyl transferase; KEGG: mbn:Mboo_1740 holo-acyl-carrier-protein synthase.
     
  0.900
Nmar_1235
TIGRFAM: DNA-directed RNA polymerase; PFAM: RNA binding S1 domain protein; RNA polymerase Rpb7 domain protein; KEGG: mja:MJ0397 DNA-directed RNA polymerase subunit E'.
 
    0.875
Nmar_0535
Hypothetical protein.
  
  
 0.770
rps6e
PFAM: Ribosomal protein S6e; KEGG: hwa:HQ1070A ribosomal protein S6.eR; Belongs to the eukaryotic ribosomal protein eS6 family.
 
    0.739
spt4
DNA-directed RNA polymerase subunit E, RpoE2; Stimulates transcription elongation; Belongs to the archaeal Spt4 family.
 
    0.734
Nmar_1301
PFAM: protein of unknown function DUF120; KEGG: hwa:HQ3236A conserved riboflavin biosynthetic operon protein; probable transtriptional regulator.
  
     0.655
tiaS
Domain of unknown function DUF1743; ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA.
 
     0.635
Nmar_1623
PFAM: DNA-binding TFAR19-related protein; KEGG: sai:Saci_1468 hypothetical programmed cell death protein 5; Belongs to the PDCD5 family.
  
    0.619
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.