STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1343TIGRFAM: ectoine hydroxylase; PFAM: Phytanoyl-CoA dioxygenase; KEGG: noc:Noc_1560 phytanoyl-CoA dioxygenase. (304 aa)    
Predicted Functional Partners:
Nmar_1344
PFAM: Ectoine synthase; Cupin 2 conserved barrel domain protein; KEGG: hch:HCH_01508 uncharacterized conserved protein, contains double-stranded beta-helix domain.
 
  
 0.984
Nmar_1345
TIGRFAM: 2,4-diaminobutyrate 4-transaminase; diaminobutyrate--2-oxoglutarate aminotransferase; PFAM: aminotransferase class-III; KEGG: mmw:Mmwyl1_1159 diaminobutyrate--2-oxoglutarate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 0.893
Nmar_1346
TIGRFAM: L-2,4-diaminobutyric acid acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: bha:BH0920 diaminobutyric acid acetyltransferase.
 
     0.815
Nmar_1347
Hypothetical protein.
       0.788
Nmar_1342
Hypothetical protein.
       0.701
eif1a-2
Translation initiation factor eIF-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
       0.535
Nmar_0734
PFAM: FAD linked oxidase domain protein; KEGG: chu:CHU_3429 probable oxidoreductase.
   
 0.422
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.