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Nmar_1485 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1485" - PFAM: regulatory protein AsnC/Lrp family in Nitrosopumilus maritimus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1485PFAM- regulatory protein AsnC/Lrp family; KEGG- sai-Saci_0731 hypothetical protein (79 aa)    
Predicted Functional Partners:
Nmar_1484
annotation not available (188 aa)
              0.801
Nmar_1486
PFAM- protein of unknown function DUF55; KEGG- rca-Rcas_2368 protein of unknown function DUF55 (139 aa)
              0.703
Nmar_1779
UPF0201 protein Nmar_1779; PFAM- Protein of unknown function DUF54; KEGG- mth-MTH433 hypothetical protein; Belongs to the UPF0201 family (134 aa)
   
          0.513
Nmar_0336
PFAM- Radical SAM domain protein; SMART- Elongator protein 3/MiaB/NifB; KEGG- mka-MK1429 Fe-S oxidoreductase (526 aa)
   
          0.476
Nmar_0246
UPF0434 protein Nmar_0246; PFAM- protein of unknown function DUF343; KEGG- tpe-Tpen_0815 protein of unknown function DUF343; Belongs to the UPF0434 family (89 aa)
   
          0.471
Nmar_0599
PFAM- Protein of unknown function DUF1512; KEGG- tpe-Tpen_0702 hypothetical protein (373 aa)
   
          0.468
Nmar_1388
PFAM- Radical SAM domain protein; KEGG- tko-TK0167 hypothetical protein (574 aa)
   
          0.432
rps27e
PFAM- Ribosomal protein S27E; KEGG- pis-Pisl_0434 ribosomal protein S27E (65 aa)
   
          0.430
Nmar_1487
annotation not available (87 aa)
              0.405
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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