Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Nmar_0246 | Nmar_1485 | Nmar_0246 | Nmar_1485 | PFAM: protein of unknown function DUF343; KEGG: tpe:Tpen_0815 protein of unknown function DUF343. | PFAM: regulatory protein AsnC/Lrp family; KEGG: sai:Saci_0731 hypothetical protein. | 0.401 |
Nmar_0246 | tiaS | Nmar_0246 | Nmar_1562 | PFAM: protein of unknown function DUF343; KEGG: tpe:Tpen_0815 protein of unknown function DUF343. | Domain of unknown function DUF1743; ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA. | 0.405 |
Nmar_1484 | Nmar_1485 | Nmar_1484 | Nmar_1485 | Hypothetical protein. | PFAM: regulatory protein AsnC/Lrp family; KEGG: sai:Saci_0731 hypothetical protein. | 0.749 |
Nmar_1484 | Nmar_1486 | Nmar_1484 | Nmar_1486 | Hypothetical protein. | PFAM: protein of unknown function DUF55; KEGG: rca:Rcas_2368 protein of unknown function DUF55. | 0.600 |
Nmar_1485 | Nmar_0246 | Nmar_1485 | Nmar_0246 | PFAM: regulatory protein AsnC/Lrp family; KEGG: sai:Saci_0731 hypothetical protein. | PFAM: protein of unknown function DUF343; KEGG: tpe:Tpen_0815 protein of unknown function DUF343. | 0.401 |
Nmar_1485 | Nmar_1484 | Nmar_1485 | Nmar_1484 | PFAM: regulatory protein AsnC/Lrp family; KEGG: sai:Saci_0731 hypothetical protein. | Hypothetical protein. | 0.749 |
Nmar_1485 | Nmar_1486 | Nmar_1485 | Nmar_1486 | PFAM: regulatory protein AsnC/Lrp family; KEGG: sai:Saci_0731 hypothetical protein. | PFAM: protein of unknown function DUF55; KEGG: rca:Rcas_2368 protein of unknown function DUF55. | 0.642 |
Nmar_1485 | tiaS | Nmar_1485 | Nmar_1562 | PFAM: regulatory protein AsnC/Lrp family; KEGG: sai:Saci_0731 hypothetical protein. | Domain of unknown function DUF1743; ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA. | 0.452 |
Nmar_1486 | Nmar_1484 | Nmar_1486 | Nmar_1484 | PFAM: protein of unknown function DUF55; KEGG: rca:Rcas_2368 protein of unknown function DUF55. | Hypothetical protein. | 0.600 |
Nmar_1486 | Nmar_1485 | Nmar_1486 | Nmar_1485 | PFAM: protein of unknown function DUF55; KEGG: rca:Rcas_2368 protein of unknown function DUF55. | PFAM: regulatory protein AsnC/Lrp family; KEGG: sai:Saci_0731 hypothetical protein. | 0.642 |
tiaS | Nmar_0246 | Nmar_1562 | Nmar_0246 | Domain of unknown function DUF1743; ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA. | PFAM: protein of unknown function DUF343; KEGG: tpe:Tpen_0815 protein of unknown function DUF343. | 0.405 |
tiaS | Nmar_1485 | Nmar_1562 | Nmar_1485 | Domain of unknown function DUF1743; ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA. | PFAM: regulatory protein AsnC/Lrp family; KEGG: sai:Saci_0731 hypothetical protein. | 0.452 |