STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1494TIGRFAM: cytidyltransferase-related domain; PFAM: cytidylyltransferase; KEGG: mtp:Mthe_0790 cytidyltransferase-related domain. (158 aa)    
Predicted Functional Partners:
Nmar_1233
Protein of unknown function DUF359; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA).
  
  
 0.931
Nmar_1721
TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; KEGG: pfu:PF1440 phosphopantothenoylcysteine synthase/decarboxylase.
    
 0.907
Nmar_1495
Hypothetical protein.
       0.670
Nmar_1493
Hypothetical protein.
       0.658
Nmar_1298
TIGRFAM: cytidyltransferase-related domain; PFAM: cytidylyltransferase; KEGG: pto:PTO1010 glycerol-3-phosphate cytidylyltransferase.
 
     0.557
Nmar_1603
PFAM: PUA domain containing protein; KEGG: rci:RCIX415 putative archaeosine tRNA-ribosyltransferase.
  
     0.465
Nmar_1492
Hypothetical protein; KEGG: mcc:703196 zinc finger CCCH-type containing 13.
       0.460
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.