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Nmar_1540 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1540" - HhH-GPD family protein in Nitrosopumilus maritimus
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
Nmar_1540HhH-GPD family protein; PFAM- helix-hairpin-helix motif; HhH-GPD family protein; 8-oxoguanine DNA glycosylase domain protein; KEGG- csc-Csac_1515 8-oxoguanine DNA glycosylase domain protein (287 aa)    
Predicted Functional Partners:
Nmar_1539
PFAM- beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG- tpe-Tpen_0446 beta-lactamase domain protein (421 aa)
 
   
  0.881
pyrB
KEGG- pho-PH0720 aspartate carbamoyltransferase catalytic chain; TIGRFAM- aspartate carbamoyltransferase; PFAM- aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain (309 aa)
 
          0.704
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (218 aa)
   
 
  0.636
dnaG
DNA primase DnaG; SMART- Toprim sub domain protein; KEGG- sso-SSO0079 Bacterial-like DNA primase (380 aa)
         
  0.597
Nmar_1538
annotation not available (70 aa)
              0.591
fen
Flap endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. Binds the unpaired 3’-DNA end and kinks the DNA to facilitate 5’ cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. A [...] (340 aa)
   
 
  0.570
radA
DNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules (388 aa)
   
 
 
  0.538
Nmar_1541
annotation not available (116 aa)
              0.511
Nmar_0388
TIGRFAM- methylated-DNA--protein-cysteine methyltransferase; PFAM- Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG- tcx-Tcr_2200 methylated-DNA--protein-cysteine methyltransferase (99 aa)
   
   
  0.506
Nmar_0087
RecA/RadA recombinase-like protein; KEGG- tac-Ta1104 probable DNA repair protein Rad51 (RadA) (217 aa)
   
 
 
  0.500
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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