STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1663PFAM: multicopper oxidase type 2; multicopper oxidase type 3; KEGG: rxy:Rxyl_0083 twin-arginine translocation pathway signal. (353 aa)    
Predicted Functional Partners:
Nmar_1662
KEGG: rxy:Rxyl_0084 putative metal cation transporter.
 
   
 0.936
Nmar_1130
KEGG: rxy:Rxyl_0084 putative metal cation transporter.
 
   
 0.734
Nmar_1664
Iron (metal) dependent repressor, DtxR family; PFAM: iron dependent repressor; KEGG: sth:STH2011 manganese transport transcriptional regulator.
       0.523
Nmar_1665
PFAM: blue (type 1) copper domain protein; KEGG: aba:Acid345_4690 plastocyanin like protein.
   
   0.515
Nmar_1661
PFAM: helix-turn-helix HxlR type; KEGG: bce:BC0856 transcriptional regulator, MarR family.
       0.403
Nmar_1354
Multicopper oxidase type 3; PFAM: blue (type 1) copper domain protein; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: fra:Francci3_2511 multicopper oxidase, type 3.
 
 
  
0.401
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
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