STRINGSTRING
Nmar_1708 protein (Nitrosopumilus maritimus) - STRING interaction network
"Nmar_1708" - PFAM: heat shock protein Hsp20 in Nitrosopumilus maritimus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nmar_1708PFAM- heat shock protein Hsp20; KEGG- mse-Msed_1294 heat shock protein HSP20; Belongs to the small heat shock protein (HSP20) family (126 aa)    
Predicted Functional Partners:
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family (218 aa)
     
   
  0.579
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP (227 aa)
 
          0.518
tmk
PFAM- thymidylate kinase; KEGG- ehi-55.t00018 thymidylate kinase, putative (193 aa)
 
        0.509
Nmar_1792
TIGRFAM- thermosome; PFAM- chaperonin Cpn60/TCP-1; KEGG- mbn-Mboo_0199 thermosome (570 aa)
   
   
  0.497
Nmar_1577
TIGRFAM- thermosome; PFAM- chaperonin Cpn60/TCP-1; KEGG- pfu-PF1974 thermosome, single subunit (540 aa)
   
   
  0.497
Nmar_0238
PFAM- 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG- tac-Ta1448m ferredoxin (163 aa)
   
   
  0.464
Nmar_0239
PFAM- 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG- tvo-TVN0119 ferredoxin (178 aa)
   
   
  0.457
Nmar_1567
PFAM- prephenate dehydratase; amino acid-binding ACT domain protein; KEGG- det-DET0461 chorismate mutase / prephenate dehydratase (271 aa)
              0.447
Nmar_0010
KEGG- mse-Msed_0640 heat shock protein HSP20 (163 aa)
   
     
  0.445
Nmar_1024
PFAM- heat shock protein DnaJ domain protein; KEGG- cfa-609460 DnaJ (Hsp40) homolog, subfamily B, member 8 (223 aa)
 
 
  0.438
Your Current Organism:
Nitrosopumilus maritimus
NCBI taxonomy Id: 436308
Other names: N. maritimus SCM1, Nitrosopumilus maritimus, Nitrosopumilus maritimus SCM1, Nitrosopumilus maritimus str. SCM1, Nitrosopumilus maritimus strain SCM1, Seattle Aquarium strain SCM1
Server load: low (10%) [HD]