STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AO062_22000Unannotated protein; Belongs to the FGGY kinase family. (508 aa)    
Predicted Functional Partners:
AO062_25450
Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family.
 
 0.960
AO062_24065
Unannotated protein.
 
 
 0.943
AO062_21990
Unannotated protein.
 
  
 0.934
xylB-2
Unannotated protein.
  
  
 
0.925
xylB
Unannotated protein.
  
  
 
0.924
AO062_05230
Unannotated protein.
    
 0.913
AO062_21975
Unannotated protein.
 
  
 0.670
rbsA
Unannotated protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
  
 0.651
AO062_21985
Unannotated protein; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.651
AO062_19805
Unannotated protein.
 
 
 0.547
Your Current Organism:
Variovorax boronicumulans
NCBI taxonomy Id: 436515
Other names: KCTC 22010, NBRC 103145, V. boronicumulans, Variovorax boronicumulans Miwa et al. 2008, strain BAM-48
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.