STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AO062_14295Unannotated protein. (557 aa)    
Predicted Functional Partners:
AO062_30885
Unannotated protein.
 
  
 0.891
AO062_12500
Unannotated protein.
  
 
 0.818
acpP
Unannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
   0.816
AO062_28735
Unannotated protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 
 0.790
AO062_29025
Unannotated protein.
   
 
 0.774
AO062_18075
Unannotated protein.
  
   0.762
AO062_24345
Unannotated protein.
  
 
 0.734
AO062_14300
Unannotated protein.
   
   0.577
AO062_27295
Unannotated protein.
  
  
 0.523
AO062_28775
Unannotated protein.
 
  
 0.489
Your Current Organism:
Variovorax boronicumulans
NCBI taxonomy Id: 436515
Other names: KCTC 22010, NBRC 103145, V. boronicumulans, Variovorax boronicumulans Miwa et al. 2008, strain BAM-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.