Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AO062_11000 | AO062_14430 | GCA_001752345_01984 | GCA_001752345_04397 | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Unannotated protein. | 0.412 |
AO062_11000 | fdhD-2 | GCA_001752345_01984 | GCA_001752345_04398 | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Unannotated protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.412 |
AO062_14420 | AO062_14425 | GCA_001752345_04395 | GCA_001752345_04396 | Unannotated protein. | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.444 |
AO062_14420 | AO062_14430 | GCA_001752345_04395 | GCA_001752345_04397 | Unannotated protein. | Unannotated protein. | 0.427 |
AO062_14420 | ModA | GCA_001752345_04395 | GCA_001752345_04394 | Unannotated protein. | Unannotated protein. | 0.980 |
AO062_14420 | fdhD-2 | GCA_001752345_04395 | GCA_001752345_04398 | Unannotated protein. | Unannotated protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.426 |
AO062_14420 | modB | GCA_001752345_04395 | GCA_001752345_04393 | Unannotated protein. | Unannotated protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.999 |
AO062_14425 | AO062_14420 | GCA_001752345_04396 | GCA_001752345_04395 | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Unannotated protein. | 0.444 |
AO062_14425 | AO062_14430 | GCA_001752345_04396 | GCA_001752345_04397 | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Unannotated protein. | 0.860 |
AO062_14425 | AO062_24165 | GCA_001752345_04396 | GCA_001752345_00098 | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.408 |
AO062_14425 | ModA | GCA_001752345_04396 | GCA_001752345_04394 | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Unannotated protein. | 0.530 |
AO062_14425 | fdhD-2 | GCA_001752345_04396 | GCA_001752345_04398 | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Unannotated protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.971 |
AO062_14425 | moaA | GCA_001752345_04396 | GCA_001752345_03559 | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Unannotated protein; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | 0.619 |
AO062_14425 | modB | GCA_001752345_04396 | GCA_001752345_04393 | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Unannotated protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.404 |
AO062_14430 | AO062_11000 | GCA_001752345_04397 | GCA_001752345_01984 | Unannotated protein. | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.412 |
AO062_14430 | AO062_14420 | GCA_001752345_04397 | GCA_001752345_04395 | Unannotated protein. | Unannotated protein. | 0.427 |
AO062_14430 | AO062_14425 | GCA_001752345_04397 | GCA_001752345_04396 | Unannotated protein. | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.860 |
AO062_14430 | AO062_24165 | GCA_001752345_04397 | GCA_001752345_00098 | Unannotated protein. | Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.477 |
AO062_14430 | AO062_24310 | GCA_001752345_04397 | GCA_001752345_00069 | Unannotated protein. | Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. | 0.414 |
AO062_14430 | GCA_001752345_00350 | GCA_001752345_04397 | GCA_001752345_00350 | Unannotated protein. | Unannotated protein. | 0.426 |
page 1 of 4