STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AO062_09405Unannotated protein. (139 aa)    
Predicted Functional Partners:
AO062_13340
Unannotated protein.
    0.941
AO062_00600
Unannotated protein.
 
  
 0.693
AO062_09400
Unannotated protein.
       0.649
AO062_09410
Unannotated protein; Belongs to the major facilitator superfamily.
  
    0.632
AO062_09395
Unannotated protein.
 
    
0.592
AO062_13335
Unannotated protein.
    0.557
AO062_09415
Unannotated protein.
  
    0.548
AO062_18115
Unannotated protein.
 
     0.503
AO062_17295
Unannotated protein.
 
    0.430
AO062_02285
Unannotated protein.
  
    0.419
Your Current Organism:
Variovorax boronicumulans
NCBI taxonomy Id: 436515
Other names: KCTC 22010, NBRC 103145, V. boronicumulans, Variovorax boronicumulans Miwa et al. 2008, strain BAM-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.