STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NirD-2Unannotated protein. (113 aa)    
Predicted Functional Partners:
AO062_18975
Unannotated protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 0.998
AO062_24180
Unannotated protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
 0.996
AO062_11225
Unannotated protein.
 0.986
AO062_24165
Unannotated protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.950
AO062_24190
Unannotated protein.
  
 
 0.932
glnA
Unannotated protein.
   
 
 0.907
AO062_25335
Unannotated protein; Belongs to the glutamine synthetase family.
   
 
 0.907
AO062_16020
Unannotated protein.
   
 
 0.902
NirD
Unannotated protein.
     
  0.900
AO062_26715
Unannotated protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.900
Your Current Organism:
Variovorax boronicumulans
NCBI taxonomy Id: 436515
Other names: KCTC 22010, NBRC 103145, V. boronicumulans, Variovorax boronicumulans Miwa et al. 2008, strain BAM-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.