STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOT11031.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (126 aa)    
Predicted Functional Partners:
AOT11032.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.562
AOT08222.1
Phage head morphogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.526
AOT08253.1
Virion morphogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.520
AOT11030.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.503
AOT08236.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.457
AOT08005.1
Universal stress protein UspE; With UspC and UspD is involved in resistance to UV irradiation; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.447
AOT08224.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.400
Your Current Organism:
Pseudoalteromonas luteoviolacea
NCBI taxonomy Id: 43657
Other names: ATCC 33492, Alteromonas luteiviolacea, Alteromonas luteo-violaceus, Alteromonas luteoviolacea, CIP 103718, DSM 6061, JCM 21275, LMG 2871, LMG:2871, NBRC 103183, P. luteoviolacea, strain CH130
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