Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALU42237.1Glucosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)    
Predicted Functional Partners:
ALU44983.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.854
ALU43889.1
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.791
ALU42238.1
Deoxyguanosinetriphosphate triphosphohydrolase; dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.565
ALU43285.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.459
ALU44271.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
   
 
 0.456
fliL
Flagellar basal body-associated protein FliL; Interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.456
ALU44753.1
Flagellar biosynthesis protein FlgH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.449
ALU44754.1
Flagellar biosynthesis protein FlgI; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.423
fliS
Flagellar protein FliS; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.404
ALU45412.1
Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.401
Your Current Organism:
Pseudoalteromonas rubra
NCBI taxonomy Id: 43658
Other names: ATCC 29570, Alteromonas rubra, CIP 104110, DSM 6842, LMG 2876, LMG:2876, P. rubra
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