Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALU42747.1Bifunctional folylpolyglutamate synthase/dihydrofolate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)    
Predicted Functional Partners:
folP
Catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate and 4-aminobenzoate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
ALU43170.1
Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.951
ALU42746.1
DedD protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.906
ALU42748.1
acetyl-CoA carboxylase subunit beta; Catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.904
ALU43698.1
Dihydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.901
ALU44478.1
Thymidylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.850
ALU42744.1
Amidophosphoribosyltransferase; Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.821
ALU42745.1
Bacteriocin production protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.799
folE
GTP cyclohydrolase I; Involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.787
truA
tRNA pseudouridine synthase A; Mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.764
Your Current Organism:
Pseudoalteromonas rubra
NCBI taxonomy Id: 43658
Other names: ATCC 29570, Alteromonas rubra, CIP 104110, DSM 6842, LMG 2876, LMG:2876, P. rubra
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