STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALU44616.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)    
Predicted Functional Partners:
ALU44617.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.892
ALU44615.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.667
ALU44620.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.619
ALU44618.1
Baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.617
ALU44619.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.617
ALU44614.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.590
ALU44613.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.563
ALU44621.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.559
ALU44612.1
Baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.556
ALU44622.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.548
Your Current Organism:
Pseudoalteromonas rubra
NCBI taxonomy Id: 43658
Other names: ATCC 29570, Alteromonas rubra, CIP 104110, DSM 6842, LMG 2876, LMG:2876, P. rubra
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.