Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALU45633.1anhydro-N-acetylmuramic acid kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)    
Predicted Functional Partners:
ALU42270.1
PTS sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.928
ALU42057.1
Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.901
ALU45632.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.856
ALU45631.1
Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
ALU43190.1
N-acetyl-anhydromuranmyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.630
ALU44024.1
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.620
ALU45996.1
Glycosyl hydrolase family 3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.605
glmU
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.542
ALU43483.1
UDP-N-acetylenolpyruvoylglucosamine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.537
murA
Adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.537
Your Current Organism:
Pseudoalteromonas rubra
NCBI taxonomy Id: 43658
Other names: ATCC 29570, Alteromonas rubra, CIP 104110, DSM 6842, LMG 2876, LMG:2876, P. rubra
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