STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJY92560.1Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)    
Predicted Functional Partners:
KJY90321.1
Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.805
KJY87029.1
Gramicidin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.805
KJY82098.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.805
KJY81379.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.805
KJY90320.1
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.794
KJY92435.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.778
damX
Cell division protein DamX; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.585
fabD
Malonyl CoA-ACP transacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.539
KJY88255.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.482
KJY89009.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.424
Your Current Organism:
Pseudoalteromonas piscicida
NCBI taxonomy Id: 43662
Other names: ATCC 15057, Alteromonas sp. (STRAIN O-7), Alteromonas sp. O-7, CIP 103300, Flavobacterium piscicida, IAM 12932, JCM 20779, NBRC 103038, NRRL B-3099, P. piscicida, Pseudomonas piscicida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.