STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJY88948.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)    
Predicted Functional Partners:
KJY88945.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.900
phoP
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.900
phoQ
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.900
KJY88944.1
Hypothetical protein; Unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.787
KJY88943.1
Sodium-dependent transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.454
Your Current Organism:
Pseudoalteromonas piscicida
NCBI taxonomy Id: 43662
Other names: ATCC 15057, Alteromonas sp. (STRAIN O-7), Alteromonas sp. O-7, CIP 103300, Flavobacterium piscicida, IAM 12932, JCM 20779, NBRC 103038, NRRL B-3099, P. piscicida, Pseudomonas piscicida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.