STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJY86685.1Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology. (1053 aa)    
Predicted Functional Partners:
KJY86686.1
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.952
KJY86682.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.928
KJY89723.1
DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.829
KJY89784.1
Restriction endonuclease subunit S; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.810
KJY87705.1
N-6 DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.753
KJY86683.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.730
KJY86684.1
Appr-1-p processing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.706
KJY87766.1
Restriction modification system DNA specificity subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.677
KJY87936.1
Carboxylate--amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.444
KJY85892.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.405
Your Current Organism:
Pseudoalteromonas piscicida
NCBI taxonomy Id: 43662
Other names: ATCC 15057, Alteromonas sp. (STRAIN O-7), Alteromonas sp. O-7, CIP 103300, Flavobacterium piscicida, IAM 12932, JCM 20779, NBRC 103038, NRRL B-3099, P. piscicida, Pseudomonas piscicida
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