STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJY85999.1Lantibiotic biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)    
Predicted Functional Partners:
KJY85998.1
Lantibiotic dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.979
KJY92453.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.651
KJY91601.1
Acetyl esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.576
raxB
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.538
KJY86000.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.470
KJY85686.1
Tyrosine beta-hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.457
KJY86694.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.455
KJY87023.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.453
KJY88230.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.449
KJY92466.1
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.444
Your Current Organism:
Pseudoalteromonas piscicida
NCBI taxonomy Id: 43662
Other names: ATCC 15057, Alteromonas sp. (STRAIN O-7), Alteromonas sp. O-7, CIP 103300, Flavobacterium piscicida, IAM 12932, JCM 20779, NBRC 103038, NRRL B-3099, P. piscicida, Pseudomonas piscicida
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.