STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJY85621.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (122 aa)    
Predicted Functional Partners:
KJY85620.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.900
KJY85619.1
Tail fiber protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.800
KJY85622.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.799
KJY85617.1
Baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.620
KJY85618.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.620
KJY85615.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.463
KJY85616.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.463
Your Current Organism:
Pseudoalteromonas piscicida
NCBI taxonomy Id: 43662
Other names: ATCC 15057, Alteromonas sp. (STRAIN O-7), Alteromonas sp. O-7, CIP 103300, Flavobacterium piscicida, IAM 12932, JCM 20779, NBRC 103038, NRRL B-3099, P. piscicida, Pseudomonas piscicida
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.