Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KZM33570.1 | KZM36078.1 | OJAG_38900 | OJAG_12820 | Hypothetical protein. | Hypothetical protein. | 0.748 |
KZM33570.1 | KZM36820.1 | OJAG_38900 | OJAG_04570 | Hypothetical protein. | Putative diguanylate cyclase. | 0.403 |
KZM36078.1 | KZM33570.1 | OJAG_12820 | OJAG_38900 | Hypothetical protein. | Hypothetical protein. | 0.748 |
KZM36078.1 | KZM36820.1 | OJAG_12820 | OJAG_04570 | Hypothetical protein. | Putative diguanylate cyclase. | 0.406 |
KZM36818.1 | KZM36820.1 | OJAG_04550 | OJAG_04570 | Major facilitator superfamily protein. | Putative diguanylate cyclase. | 0.480 |
KZM36818.1 | kmtR | OJAG_04550 | OJAG_04560 | Major facilitator superfamily protein. | HTH-type transcriptional regulator KmtR. | 0.822 |
KZM36820.1 | KZM33570.1 | OJAG_04570 | OJAG_38900 | Putative diguanylate cyclase. | Hypothetical protein. | 0.403 |
KZM36820.1 | KZM36078.1 | OJAG_04570 | OJAG_12820 | Putative diguanylate cyclase. | Hypothetical protein. | 0.406 |
KZM36820.1 | KZM36818.1 | OJAG_04570 | OJAG_04550 | Putative diguanylate cyclase. | Major facilitator superfamily protein. | 0.480 |
KZM36820.1 | cph1_1 | OJAG_04570 | OJAG_14440 | Putative diguanylate cyclase. | Phytochrome-like protein cph1. | 0.499 |
KZM36820.1 | ctrA | OJAG_04570 | OJAG_14450 | Putative diguanylate cyclase. | Cell cycle response regulator CtrA. | 0.421 |
KZM36820.1 | gltB_2 | OJAG_04570 | OJAG_31720 | Putative diguanylate cyclase. | Glutamate synthase [NADPH] large chain. | 0.416 |
KZM36820.1 | kmtR | OJAG_04570 | OJAG_04560 | Putative diguanylate cyclase. | HTH-type transcriptional regulator KmtR. | 0.480 |
KZM36820.1 | livK | OJAG_04570 | OJAG_29980 | Putative diguanylate cyclase. | Leucine-specific-binding protein precursor. | 0.661 |
cph1_1 | KZM36820.1 | OJAG_14440 | OJAG_04570 | Phytochrome-like protein cph1. | Putative diguanylate cyclase. | 0.499 |
cph1_1 | ctrA | OJAG_14440 | OJAG_14450 | Phytochrome-like protein cph1. | Cell cycle response regulator CtrA. | 0.986 |
ctrA | KZM36820.1 | OJAG_14450 | OJAG_04570 | Cell cycle response regulator CtrA. | Putative diguanylate cyclase. | 0.421 |
ctrA | cph1_1 | OJAG_14450 | OJAG_14440 | Cell cycle response regulator CtrA. | Phytochrome-like protein cph1. | 0.986 |
gltB_2 | KZM36820.1 | OJAG_31720 | OJAG_04570 | Glutamate synthase [NADPH] large chain. | Putative diguanylate cyclase. | 0.416 |
gltB_2 | livK | OJAG_31720 | OJAG_29980 | Glutamate synthase [NADPH] large chain. | Leucine-specific-binding protein precursor. | 0.764 |
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