STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gsiA_3Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily. (607 aa)    
Predicted Functional Partners:
dppC
Dipeptide transport system permease protein DppC.
 
 0.955
oppC_1
Oligopeptide transport system permease protein OppC.
 
 0.928
gsiD_3
Glutathione transport system permease protein GsiD.
 
 0.925
gsiD_2
Glutathione transport system permease protein GsiD.
 
 0.914
dppB_2
Dipeptide transport system permease protein DppB.
 
 
 0.896
oppC_2
Oligopeptide transport system permease protein OppC.
 
 0.895
dppB_1
Dipeptide transport system permease protein DppB.
 
 
 0.882
gsiD_1
Glutathione transport system permease protein GsiD.
 
 0.863
gsiC_3
Glutathione transport system permease protein GsiC.
 
 
 0.861
gsiC_1
Glutathione transport system permease protein GsiC.
 
 0.860
Your Current Organism:
Oerskovia enterophila
NCBI taxonomy Id: 43678
Other names: ATCC 35307, DSM 43852, HMGB B1078, IFO 14295, JCM 7350, NBRC 14295, NRRL B-16223, O. enterophila, Promicromonospora enterophila, strain DFA-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.