Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KZM35973.1 | KZM35989.1 | OJAG_12980 | OJAG_13140 | Glycogen synthase. | O-antigen ligase. | 0.550 |
KZM35973.1 | epsL | OJAG_12980 | OJAG_02560 | Glycogen synthase. | Putative sugar transferase EpsL. | 0.722 |
KZM35973.1 | glgB | OJAG_12980 | OJAG_12000 | Glycogen synthase. | 1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.717 |
KZM35973.1 | kanF | OJAG_12980 | OJAG_13150 | Glycogen synthase. | 2-deoxystreptamine glucosyltransferase. | 0.724 |
KZM35973.1 | mshA_2 | OJAG_12980 | OJAG_13170 | Glycogen synthase. | D-inositol 3-phosphate glycosyltransferase. | 0.564 |
KZM35973.1 | mshA_3 | OJAG_12980 | OJAG_13190 | Glycogen synthase. | D-inositol-3-phosphate glycosyltransferase. | 0.645 |
KZM35973.1 | treZ | OJAG_12980 | OJAG_00800 | Glycogen synthase. | Malto-oligosyltrehalose trehalohydrolase. | 0.647 |
KZM35973.1 | tuaH | OJAG_12980 | OJAG_13160 | Glycogen synthase. | Putative teichuronic acid biosynthesis glycosyltransferase TuaH. | 0.487 |
KZM35973.1 | wzc | OJAG_12980 | OJAG_13180 | Glycogen synthase. | Tyrosine-protein kinase wzc. | 0.483 |
KZM35989.1 | KZM35973.1 | OJAG_13140 | OJAG_12980 | O-antigen ligase. | Glycogen synthase. | 0.550 |
KZM35989.1 | epsL | OJAG_13140 | OJAG_02560 | O-antigen ligase. | Putative sugar transferase EpsL. | 0.961 |
KZM35989.1 | kanF | OJAG_13140 | OJAG_13150 | O-antigen ligase. | 2-deoxystreptamine glucosyltransferase. | 0.951 |
KZM35989.1 | mshA_1 | OJAG_13140 | OJAG_13130 | O-antigen ligase. | D-inositol 3-phosphate glycosyltransferase. | 0.961 |
KZM35989.1 | mshA_2 | OJAG_13140 | OJAG_13170 | O-antigen ligase. | D-inositol 3-phosphate glycosyltransferase. | 0.792 |
KZM35989.1 | mshA_3 | OJAG_13140 | OJAG_13190 | O-antigen ligase. | D-inositol-3-phosphate glycosyltransferase. | 0.707 |
KZM35989.1 | tuaH | OJAG_13140 | OJAG_13160 | O-antigen ligase. | Putative teichuronic acid biosynthesis glycosyltransferase TuaH. | 0.948 |
KZM35989.1 | wzc | OJAG_13140 | OJAG_13180 | O-antigen ligase. | Tyrosine-protein kinase wzc. | 0.780 |
epsL | KZM35973.1 | OJAG_02560 | OJAG_12980 | Putative sugar transferase EpsL. | Glycogen synthase. | 0.722 |
epsL | KZM35989.1 | OJAG_02560 | OJAG_13140 | Putative sugar transferase EpsL. | O-antigen ligase. | 0.961 |
epsL | kanF | OJAG_02560 | OJAG_13150 | Putative sugar transferase EpsL. | 2-deoxystreptamine glucosyltransferase. | 0.754 |
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