Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KZM35499.1 | KZM35683.1 | OJAG_17610 | OJAG_16460 | Hypothetical protein. | Major facilitator superfamily protein. | 0.414 |
KZM35604.1 | KZM35683.1 | OJAG_17110 | OJAG_16460 | Hypothetical protein. | Major facilitator superfamily protein. | 0.566 |
KZM35604.1 | KZM36542.1 | OJAG_17110 | OJAG_07410 | Hypothetical protein. | Hypothetical protein. | 0.498 |
KZM35682.1 | KZM35683.1 | OJAG_16450 | OJAG_16460 | Hypothetical protein. | Major facilitator superfamily protein. | 0.512 |
KZM35682.1 | dapE_4 | OJAG_16450 | OJAG_16470 | Hypothetical protein. | Succinyl-diaminopimelate desuccinylase. | 0.512 |
KZM35683.1 | KZM35499.1 | OJAG_16460 | OJAG_17610 | Major facilitator superfamily protein. | Hypothetical protein. | 0.414 |
KZM35683.1 | KZM35604.1 | OJAG_16460 | OJAG_17110 | Major facilitator superfamily protein. | Hypothetical protein. | 0.566 |
KZM35683.1 | KZM35682.1 | OJAG_16460 | OJAG_16450 | Major facilitator superfamily protein. | Hypothetical protein. | 0.512 |
KZM35683.1 | KZM36542.1 | OJAG_16460 | OJAG_07410 | Major facilitator superfamily protein. | Hypothetical protein. | 0.405 |
KZM35683.1 | dapE_4 | OJAG_16460 | OJAG_16470 | Major facilitator superfamily protein. | Succinyl-diaminopimelate desuccinylase. | 0.906 |
KZM36542.1 | KZM35604.1 | OJAG_07410 | OJAG_17110 | Hypothetical protein. | Hypothetical protein. | 0.498 |
KZM36542.1 | KZM35683.1 | OJAG_07410 | OJAG_16460 | Hypothetical protein. | Major facilitator superfamily protein. | 0.405 |
dapE_4 | KZM35682.1 | OJAG_16470 | OJAG_16450 | Succinyl-diaminopimelate desuccinylase. | Hypothetical protein. | 0.512 |
dapE_4 | KZM35683.1 | OJAG_16470 | OJAG_16460 | Succinyl-diaminopimelate desuccinylase. | Major facilitator superfamily protein. | 0.906 |