STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZM35295.1Hypothetical protein; Bacterial transglutaminase-like N-terminal region. (289 aa)    
Predicted Functional Partners:
KZM35294.1
Hypothetical protein.
    0.990
KZM35293.1
Hypothetical protein.
 
    0.977
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.645
KZM37066.1
Glutamine amidotransferase.
 
 
  0.517
katA
Catalase; Belongs to the catalase family.
   
   0.510
KZM35292.1
Hypothetical protein.
       0.491
KZM35453.1
VIT family protein.
    
  0.435
KZM33750.1
VIT family protein.
    
  0.435
lepA
Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
  
    0.408
Your Current Organism:
Oerskovia enterophila
NCBI taxonomy Id: 43678
Other names: ATCC 35307, DSM 43852, HMGB B1078, IFO 14295, JCM 7350, NBRC 14295, NRRL B-16223, O. enterophila, Promicromonospora enterophila, strain DFA-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.