STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZM34368.1F5/8 type C domain protein. (1115 aa)    
Predicted Functional Partners:
KZM34715.1
Beta/alpha-amylase precursor.
  
     0.633
KZM34108.1
Hypothetical protein.
  
     0.604
KZM34367.1
Hypothetical protein; CARDB.
 
    
0.563
betI_2
HTH-type transcriptional regulator BetI.
  
     0.532
KZM33495.1
Endoglucanase E1 precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.527
KZM33822.1
F5/8 type C domain protein.
  
     0.513
afsR
Regulatory protein AfsR.
  
     0.511
KZM33728.1
Bacterial extracellular solute-binding protein.
  
     0.445
KZM34861.1
Phosphotransferase enzyme family protein.
  
     0.425
Your Current Organism:
Oerskovia enterophila
NCBI taxonomy Id: 43678
Other names: ATCC 35307, DSM 43852, HMGB B1078, IFO 14295, JCM 7350, NBRC 14295, NRRL B-16223, O. enterophila, Promicromonospora enterophila, strain DFA-19
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