STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZM33825.1Putative sugar-binding periplasmic protein precursor. (429 aa)    
Predicted Functional Partners:
ycjP_2
Inner membrane ABC transporter permease protein YcjP.
 
 0.992
ycjO_4
Inner membrane ABC transporter permease protein YcjO.
 
  0.967
sugC_1
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
   
 0.829
sugC_2
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
   
 0.829
sugA
Trehalose transport system permease protein SugA.
  
 0.771
lacF_4
Lactose transport system permease protein LacF.
  
 0.771
ugpA_2
Sn-glycerol-3-phosphate transport system permease protein UgpA.
  
  0.749
lacF_5
Lactose transport system permease protein LacF.
  
  0.749
ycjO_2
Inner membrane ABC transporter permease protein YcjO.
  
  0.745
lacF_6
Lactose transport system permease protein LacF.
  
  0.731
Your Current Organism:
Oerskovia enterophila
NCBI taxonomy Id: 43678
Other names: ATCC 35307, DSM 43852, HMGB B1078, IFO 14295, JCM 7350, NBRC 14295, NRRL B-16223, O. enterophila, Promicromonospora enterophila, strain DFA-19
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