STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kpol_1018p29Rab-GAP TBC domain-containing protein. (938 aa)    
Predicted Functional Partners:
Kpol_1023p21
Uncharacterized protein.
    
 0.805
Kpol_1042p2
Uncharacterized protein.
    
 0.781
Kpol_440p10
Uncharacterized protein.
    
 
 0.609
Kpol_1011p20
Rab-GAP TBC domain-containing protein.
      
 0.522
Kpol_1018p75
Rab-GAP TBC domain-containing protein.
    
 
0.486
Kpol_520p30
BAR domain-containing protein.
    
 
 0.467
Kpol_1066p11
Uncharacterized protein.
    
 0.466
Kpol_1016p24
Uncharacterized protein.
    
 0.466
Kpol_1029p16
Uncharacterized protein.
    
 0.466
Kpol_1050p14
BAR domain-containing protein.
    
 
 0.463
Your Current Organism:
Vanderwaltozyma polyspora
NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.