STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kpol_1023p50RNB domain-containing protein. (1253 aa)    
Predicted Functional Partners:
Kpol_1015p4
EXOSC1 domain-containing protein.
   
 0.959
Kpol_1051p10
Uncharacterized protein.
   
 0.958
Kpol_1010p39
RNase_PH domain-containing protein.
   
 0.954
Kpol_1014p28
Uncharacterized protein.
   
 0.949
Kpol_1005p15
Uncharacterized protein.
   
 0.948
Kpol_473p23
Uncharacterized protein.
   
 0.947
Kpol_1037p29
HRDC domain-containing protein.
   
 0.939
Kpol_534p9
RNase_PH domain-containing protein.
   
 0.929
Kpol_1035p20
Uncharacterized protein.
   
 0.889
Kpol_2002p50
RNase_PH domain-containing protein.
   
 0.837
Your Current Organism:
Vanderwaltozyma polyspora
NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.