STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kpol_1028p66Uncharacterized protein; Belongs to the glycosyl hydrolase 17 family. (385 aa)    
Predicted Functional Partners:
Kpol_480p8
SH3 domain-containing protein.
    
 0.786
Kpol_1054p34
Uncharacterized protein.
    
 0.636
Kpol_1072p48
Uncharacterized protein.
    
 0.636
Kpol_147p3
Uncharacterized protein.
    
 0.636
Kpol_1035p48
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 
 0.605
Kpol_1013p10
Uncharacterized protein.
   
 0.552
Kpol_1056p30
Uncharacterized protein.
    
 0.463
Kpol_505p1
Uncharacterized protein.
    
 0.463
Kpol_1026p12
Uncharacterized protein.
    
 0.463
Kpol_1029p8
Uncharacterized protein.
    
 0.463
Your Current Organism:
Vanderwaltozyma polyspora
NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294
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