STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kpol_1055p73Uncharacterized protein. (605 aa)    
Predicted Functional Partners:
Kpol_1003p47
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 
 0.926
Kpol_1043p55
TAFII55_N domain-containing protein.
    
 
 0.905
Kpol_1062p47
SANT_DAMP1_like domain-containing protein.
    
 
 0.782
Kpol_1030p2
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
 
  
 
 0.745
Kpol_513p21
Uncharacterized protein.
    
 
 0.744
Kpol_1003p46
Histone H3; Belongs to the histone H3 family.
   
 
 0.727
Kpol_181p3
Histone domain-containing protein.
   
 
 0.727
Kpol_1035p49
Histone H2A; Belongs to the histone H2A family.
    
 
 0.721
Kpol_1055p13
Uncharacterized protein.
   
 
 0.709
Kpol_505p11
Uncharacterized protein.
    
 
 0.659
Your Current Organism:
Vanderwaltozyma polyspora
NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.