STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kpol_1061p37Zn(2)-C6 fungal-type domain-containing protein. (649 aa)    
Predicted Functional Partners:
Kpol_1026p30
NodB homology domain-containing protein.
   
 0.680
Kpol_1016p5
Uncharacterized protein.
   
 0.680
Kpol_1020p49
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 0.668
Kpol_1048p47
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.667
Kpol_2000p81
Uncharacterized protein.
   
  0.664
Kpol_2002p99
WD_REPEATS_REGION domain-containing protein.
   
  0.663
Kpol_1017p12
CBF domain-containing protein.
    
 0.663
Kpol_1055p18
PINc domain-containing protein.
    
  0.662
Kpol_431p7
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
    
  0.662
Kpol_2002p9
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
  0.657
Your Current Organism:
Vanderwaltozyma polyspora
NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294
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