STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kpol_1037p22HDAC_interact domain-containing protein. (1496 aa)    
Predicted Functional Partners:
Kpol_1061p19
Zn(2)-C6 fungal-type domain-containing protein.
    
 0.985
Kpol_1038p11
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.968
Kpol_1043p35
Uncharacterized protein.
   
 0.900
Kpol_1006p12
MRG domain-containing protein.
   
 0.880
Kpol_1002p11
PHD-type domain-containing protein.
   
 
 0.865
Kpol_1036p91
Small nuclear ribonucleoprotein Sm D3.
     
 0.801
Kpol_376p15
Hist_deacetyl domain-containing protein.
   
 0.761
Kpol_246p5
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.761
Kpol_1029p10
Chromatin modification-related protein.
   
 
 0.730
Kpol_1024p39
WD_REPEATS_REGION domain-containing protein.
   
 0.726
Your Current Organism:
Vanderwaltozyma polyspora
NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.