STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kpol_526p35RING-type domain-containing protein. (655 aa)    
Predicted Functional Partners:
Kpol_480p28
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.667
Kpol_1028p75
Uncharacterized protein.
    
 
 0.658
Kpol_1028p107
S10_plectin domain-containing protein.
    
 
 0.639
Kpol_380p3
Ribosomal_S10 domain-containing protein.
    
 
 0.637
Kpol_1048p36
GYF domain-containing protein.
    
 
 0.622
Kpol_1048p72
Uncharacterized protein.
   
 
 0.622
Kpol_487p13
Uncharacterized protein.
   
 
 0.622
Kpol_480p25
RING-type domain-containing protein.
    
 
 0.603
Kpol_297p7
WD_REPEATS_REGION domain-containing protein.
    
 
 0.593
Kpol_1058p36
Uncharacterized protein.
      
 0.586
Your Current Organism:
Vanderwaltozyma polyspora
NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.