Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Kpol_1003p26 | Kpol_1005p1 | A7TLY4 | A7TS28 | CS domain-containing protein. | Uncharacterized protein. | 0.558 |
Kpol_1003p26 | Kpol_1020p17 | A7TLY4 | A7TLC8 | CS domain-containing protein. | TruB_N domain-containing protein. | 0.939 |
Kpol_1003p26 | Kpol_1030p2 | A7TLY4 | A7TMS2 | CS domain-containing protein. | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | 0.625 |
Kpol_1003p26 | Kpol_1031p62 | A7TLY4 | A7THZ3 | CS domain-containing protein. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.545 |
Kpol_1003p26 | Kpol_1048p16 | A7TLY4 | A7TGH9 | CS domain-containing protein. | Uncharacterized protein. | 0.711 |
Kpol_1003p26 | Kpol_1051p6 | A7TLY4 | A7TMX0 | CS domain-containing protein. | Uncharacterized protein. | 0.866 |
Kpol_1003p26 | Kpol_1055p15 | A7TLY4 | A7TG89 | CS domain-containing protein. | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | 0.937 |
Kpol_1003p26 | Kpol_1060p32 | A7TLY4 | A7TK30 | CS domain-containing protein. | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | 0.589 |
Kpol_1003p26 | Kpol_487p9 | A7TLY4 | A7TQ84 | CS domain-containing protein. | PUA domain-containing protein. | 0.999 |
Kpol_1003p26 | NOP58 | A7TLY4 | A7TIF5 | CS domain-containing protein. | Nucleolar protein 58; Required for pre-18S rRNA processing. May bind microtubules (By similarity); Belongs to the NOP5/NOP56 family. | 0.591 |
Kpol_1005p1 | Kpol_1003p26 | A7TS28 | A7TLY4 | Uncharacterized protein. | CS domain-containing protein. | 0.558 |
Kpol_1005p1 | Kpol_1030p2 | A7TS28 | A7TMS2 | Uncharacterized protein. | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | 0.964 |
Kpol_1005p1 | Kpol_1060p32 | A7TS28 | A7TK30 | Uncharacterized protein. | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | 0.955 |
Kpol_1005p1 | NOP58 | A7TS28 | A7TIF5 | Uncharacterized protein. | Nucleolar protein 58; Required for pre-18S rRNA processing. May bind microtubules (By similarity); Belongs to the NOP5/NOP56 family. | 0.898 |
Kpol_1020p17 | Kpol_1003p26 | A7TLC8 | A7TLY4 | TruB_N domain-containing protein. | CS domain-containing protein. | 0.939 |
Kpol_1020p17 | Kpol_1030p2 | A7TLC8 | A7TMS2 | TruB_N domain-containing protein. | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | 0.674 |
Kpol_1020p17 | Kpol_1031p62 | A7TLC8 | A7THZ3 | TruB_N domain-containing protein. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.917 |
Kpol_1020p17 | Kpol_1048p16 | A7TLC8 | A7TGH9 | TruB_N domain-containing protein. | Uncharacterized protein. | 0.838 |
Kpol_1020p17 | Kpol_1051p6 | A7TLC8 | A7TMX0 | TruB_N domain-containing protein. | Uncharacterized protein. | 0.965 |
Kpol_1020p17 | Kpol_1055p15 | A7TLC8 | A7TG89 | TruB_N domain-containing protein. | H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. | 0.973 |
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