STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kpol_520p43Uncharacterized protein. (2267 aa)    
Predicted Functional Partners:
Kpol_2000p37
Uncharacterized protein.
   
 
 0.963
Kpol_162p1
RPOLA_N domain-containing protein.
   
 
 0.781
Kpol_1019p27
RNA_pol_Rpb1_1 domain-containing protein.
   
 
 0.695
Kpol_473p8
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.
   
 
 0.649
Kpol_1028p104
RNase H domain-containing protein.
    
 
 0.609
Kpol_1037p29
HRDC domain-containing protein.
    
 
 0.599
Kpol_269p3
CID domain-containing protein.
   
  
 0.593
Kpol_1030p7
Sister chromatid cohesion protein.
   
    0.587
Kpol_1051p10
Uncharacterized protein.
   
 
 0.555
Kpol_1003p2
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.554
Your Current Organism:
Vanderwaltozyma polyspora
NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294
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