Kpol_483p19 protein (Vanderwaltozyma polyspora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Kpol_483p19

Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (684 aa)

Predicted Functional Partners:

Kpol_1036p92

0.996

Kpol_1055p37

0.996

Kpol_1055p65

0.996

Kpol_1030p29

0.996

Kpol_333p9

0.996

Kpol_1054p5

0.994

Kpol_1062p53

0.989

Kpol_1037p28

0.981

Kpol_543p47

0.980

Kpol_526p9

0.980

Your Current Organism:

Vanderwaltozyma polyspora

NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Kpol_1030p29	Kpol_1036p92	A7TMU7	A7TEN8	E3 ubiquitin-protein ligase PEP5.	RING-type domain-containing protein.	0.996
Kpol_1030p29	Kpol_1037p28	A7TMU7	A7TJX0	E3 ubiquitin-protein ligase PEP5.	Uncharacterized protein.	0.981
Kpol_1030p29	Kpol_1054p5	A7TMU7	A7TI94	E3 ubiquitin-protein ligase PEP5.	CNH domain-containing protein.	0.996
Kpol_1030p29	Kpol_1055p37	A7TMU7	A7TGB2	E3 ubiquitin-protein ligase PEP5.	Uncharacterized protein.	0.996
Kpol_1030p29	Kpol_1055p65	A7TMU7	A7TGD8	E3 ubiquitin-protein ligase PEP5.	Uncharacterized protein.	0.996
Kpol_1030p29	Kpol_1062p53	A7TMU7	A7TKA8	E3 ubiquitin-protein ligase PEP5.	WD_REPEATS_REGION domain-containing protein.	0.994
Kpol_1030p29	Kpol_333p9	A7TMU7	A7TSM6	E3 ubiquitin-protein ligase PEP5.	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	0.996
Kpol_1030p29	Kpol_483p19	A7TMU7	A7TQ71	E3 ubiquitin-protein ligase PEP5.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.996
Kpol_1030p29	Kpol_526p9	A7TMU7	A7TLR4	E3 ubiquitin-protein ligase PEP5.	Uncharacterized protein.	0.981
Kpol_1036p92	Kpol_1030p29	A7TEN8	A7TMU7	RING-type domain-containing protein.	E3 ubiquitin-protein ligase PEP5.	0.996
Kpol_1036p92	Kpol_1037p28	A7TEN8	A7TJX0	RING-type domain-containing protein.	Uncharacterized protein.	0.981
Kpol_1036p92	Kpol_1054p5	A7TEN8	A7TI94	RING-type domain-containing protein.	CNH domain-containing protein.	0.995
Kpol_1036p92	Kpol_1055p37	A7TEN8	A7TGB2	RING-type domain-containing protein.	Uncharacterized protein.	0.996
Kpol_1036p92	Kpol_1055p65	A7TEN8	A7TGD8	RING-type domain-containing protein.	Uncharacterized protein.	0.996
Kpol_1036p92	Kpol_1062p53	A7TEN8	A7TKA8	RING-type domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.994
Kpol_1036p92	Kpol_333p9	A7TEN8	A7TSM6	RING-type domain-containing protein.	Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.	0.996
Kpol_1036p92	Kpol_483p19	A7TEN8	A7TQ71	RING-type domain-containing protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.996
Kpol_1036p92	Kpol_526p9	A7TEN8	A7TLR4	RING-type domain-containing protein.	Uncharacterized protein.	0.981
Kpol_1036p92	Kpol_543p47	A7TEN8	A7THQ1	RING-type domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.541
Kpol_1037p28	Kpol_1030p29	A7TJX0	A7TMU7	Uncharacterized protein.	E3 ubiquitin-protein ligase PEP5.	0.981