STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kpol_487p5Ribosomal_L27_C domain-containing protein. (371 aa)    
Predicted Functional Partners:
Kpol_1018p47
Uncharacterized protein.
  
 
 0.999
Kpol_1002p54
Uncharacterized protein.
  
 
 0.999
Kpol_1002p73
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.999
Kpol_1036p20
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.999
Kpol_1050p7
Uncharacterized protein.
  
 
 0.999
Kpol_1023p94
Uncharacterized protein.
  
 
 0.999
Kpol_1028p59
Uncharacterized protein.
  
 
 0.999
Kpol_1058p40
Uncharacterized protein.
  
 
 0.999
Kpol_1060p22
Uncharacterized protein.
  
 
 0.999
Kpol_1020p29
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.999
Your Current Organism:
Vanderwaltozyma polyspora
NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294
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