STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kpol_1011p20Rab-GAP TBC domain-containing protein. (496 aa)    
Predicted Functional Partners:
Kpol_1023p21
Uncharacterized protein.
    
 0.992
Kpol_1018p75
Rab-GAP TBC domain-containing protein.
   
 
 0.556
Kpol_1014p41
Rab-GAP TBC domain-containing protein.
   
  
 0.549
Kpol_359p9
Uncharacterized protein.
      
 0.548
Kpol_1018p29
Rab-GAP TBC domain-containing protein.
      
 0.522
Kpol_543p70
Rab-GAP TBC domain-containing protein.
    
 
 0.504
NAR1
Cytosolic Fe-S cluster assembly factor NAR1; Component of the cytosolic Fe/S protein assembly machinery. Required for maturation of extramitochondrial Fe/S proteins. May play a role in the transfer of pre-assembled Fe/S clusters to target apoproteins (By similarity).
   
  
 0.491
Kpol_1057p14
Uncharacterized protein.
      
 0.459
Your Current Organism:
Vanderwaltozyma polyspora
NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.