STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kpol_423p2Uncharacterized protein. (419 aa)    
Predicted Functional Partners:
Kpol_1023p85
Uncharacterized protein.
    
 
 0.956
Kpol_1050p63
Uncharacterized protein.
    
 
 0.913
MRPL4
54S ribosomal protein L4, mitochondrial; Belongs to the universal ribosomal protein uL29 family.
   
 
 0.828
Kpol_325p3
Uncharacterized protein.
   
 
 0.795
Kpol_480p30
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.791
Kpol_1002p54
Uncharacterized protein.
   
 
 0.774
Kpol_1004p49
Uncharacterized protein.
   
 
 0.772
Kpol_364p11
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.763
Kpol_186p1
Uncharacterized protein.
   
 
 0.762
Kpol_2000p38
MRP-L46 domain-containing protein.
   
 
 0.761
Your Current Organism:
Vanderwaltozyma polyspora
NCBI taxonomy Id: 436907
Other names: V. polyspora DSM 70294, Vanderwaltozyma polyspora DSM 70294, Vanderwaltozyma polyspora DSMZ 70294
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