Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Kpol_1007p11 | Kpol_1053p38 | A7TRT3 | A7TN82 | ERCC4 domain-containing protein. | DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.764 |
Kpol_1007p11 | Kpol_309p8 | A7TRT3 | A7TSX3 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.999 |
Kpol_1007p11 | Kpol_316p3 | A7TRT3 | A7TSP3 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.759 |
Kpol_1007p11 | Kpol_440p9 | A7TRT3 | A7TRE8 | ERCC4 domain-containing protein. | ERCC4 domain-containing protein. | 0.909 |
Kpol_1007p11 | MSH3 | A7TRT3 | A7TTQ1 | ERCC4 domain-containing protein. | DNA mismatch repair protein MSH3; Component of the post-replicative DNA mismatch repair system (MMR). Heterodimerizes with MSH2 to form MutS beta, which binds to DNA mismatches thereby initiating DNA repair. MSH3 provides substrate- binding and substrate specificity to the complex. When bound, the MutS beta heterodimer bends the DNA helix and shields approximately 20 base pairs. Acts mainly to repair insertion-deletion loops (IDLs) from 2 to 13 nucleotides in size, but can also repair base-base and single insertion-deletion mismatches that occur during replication. After mismatch bindi [...] | 0.617 |
Kpol_1053p38 | Kpol_1007p11 | A7TN82 | A7TRT3 | DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). | ERCC4 domain-containing protein. | 0.764 |
Kpol_1053p38 | Kpol_309p8 | A7TN82 | A7TSX3 | DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). | Uncharacterized protein. | 0.786 |
Kpol_1053p38 | Kpol_316p3 | A7TN82 | A7TSP3 | DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). | Uncharacterized protein. | 0.443 |
Kpol_1053p38 | Kpol_440p9 | A7TN82 | A7TRE8 | DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). | ERCC4 domain-containing protein. | 0.611 |
Kpol_1053p38 | MSH3 | A7TN82 | A7TTQ1 | DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). | DNA mismatch repair protein MSH3; Component of the post-replicative DNA mismatch repair system (MMR). Heterodimerizes with MSH2 to form MutS beta, which binds to DNA mismatches thereby initiating DNA repair. MSH3 provides substrate- binding and substrate specificity to the complex. When bound, the MutS beta heterodimer bends the DNA helix and shields approximately 20 base pairs. Acts mainly to repair insertion-deletion loops (IDLs) from 2 to 13 nucleotides in size, but can also repair base-base and single insertion-deletion mismatches that occur during replication. After mismatch bindi [...] | 0.999 |
Kpol_309p8 | Kpol_1007p11 | A7TSX3 | A7TRT3 | Uncharacterized protein. | ERCC4 domain-containing protein. | 0.999 |
Kpol_309p8 | Kpol_1053p38 | A7TSX3 | A7TN82 | Uncharacterized protein. | DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.786 |
Kpol_309p8 | Kpol_316p3 | A7TSX3 | A7TSP3 | Uncharacterized protein. | Uncharacterized protein. | 0.699 |
Kpol_309p8 | Kpol_440p9 | A7TSX3 | A7TRE8 | Uncharacterized protein. | ERCC4 domain-containing protein. | 0.971 |
Kpol_309p8 | MSH3 | A7TSX3 | A7TTQ1 | Uncharacterized protein. | DNA mismatch repair protein MSH3; Component of the post-replicative DNA mismatch repair system (MMR). Heterodimerizes with MSH2 to form MutS beta, which binds to DNA mismatches thereby initiating DNA repair. MSH3 provides substrate- binding and substrate specificity to the complex. When bound, the MutS beta heterodimer bends the DNA helix and shields approximately 20 base pairs. Acts mainly to repair insertion-deletion loops (IDLs) from 2 to 13 nucleotides in size, but can also repair base-base and single insertion-deletion mismatches that occur during replication. After mismatch bindi [...] | 0.670 |
Kpol_316p3 | Kpol_1007p11 | A7TSP3 | A7TRT3 | Uncharacterized protein. | ERCC4 domain-containing protein. | 0.759 |
Kpol_316p3 | Kpol_1053p38 | A7TSP3 | A7TN82 | Uncharacterized protein. | DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). | 0.443 |
Kpol_316p3 | Kpol_309p8 | A7TSP3 | A7TSX3 | Uncharacterized protein. | Uncharacterized protein. | 0.699 |
Kpol_316p3 | Kpol_440p9 | A7TSP3 | A7TRE8 | Uncharacterized protein. | ERCC4 domain-containing protein. | 0.500 |
Kpol_316p3 | MSH3 | A7TSP3 | A7TTQ1 | Uncharacterized protein. | DNA mismatch repair protein MSH3; Component of the post-replicative DNA mismatch repair system (MMR). Heterodimerizes with MSH2 to form MutS beta, which binds to DNA mismatches thereby initiating DNA repair. MSH3 provides substrate- binding and substrate specificity to the complex. When bound, the MutS beta heterodimer bends the DNA helix and shields approximately 20 base pairs. Acts mainly to repair insertion-deletion loops (IDLs) from 2 to 13 nucleotides in size, but can also repair base-base and single insertion-deletion mismatches that occur during replication. After mismatch bindi [...] | 0.445 |
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