Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Kpol_1029p3 | Kpol_1053p46 | A7TR62 | A7TN90 | RRM domain-containing protein. | Brix domain-containing protein. | 0.998 |
Kpol_1029p3 | Kpol_1055p47 | A7TR62 | A7TGC1 | RRM domain-containing protein. | Uncharacterized protein. | 0.988 |
Kpol_1029p3 | Kpol_178p2 | A7TR62 | A7TTN8 | RRM domain-containing protein. | Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. | 0.984 |
Kpol_1029p3 | Kpol_2001p32 | A7TR62 | A7TGR4 | RRM domain-containing protein. | Uncharacterized protein. | 0.997 |
Kpol_1029p3 | Kpol_316p5 | A7TR62 | A7TSP5 | RRM domain-containing protein. | Protein MAK16; Belongs to the MAK16 family. | 0.983 |
Kpol_1029p3 | Kpol_365p6 | A7TR62 | A7TS03 | RRM domain-containing protein. | Brix domain-containing protein. | 0.997 |
Kpol_1029p3 | Kpol_397p1 | A7TR62 | A7TRF3 | RRM domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.997 |
Kpol_1029p3 | NSA1 | A7TR62 | A7TJL1 | RRM domain-containing protein. | Ribosome biogenesis protein NSA1; Involved in the biogenesis of the 60S ribosomal subunit. | 0.987 |
Kpol_1029p3 | SPB1 | A7TR62 | A7TFD2 | RRM domain-containing protein. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.995 |
Kpol_1029p3 | YTM1 | A7TR62 | A7TMF9 | RRM domain-containing protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.995 |
Kpol_1053p46 | Kpol_1029p3 | A7TN90 | A7TR62 | Brix domain-containing protein. | RRM domain-containing protein. | 0.998 |
Kpol_1053p46 | Kpol_1055p47 | A7TN90 | A7TGC1 | Brix domain-containing protein. | Uncharacterized protein. | 0.997 |
Kpol_1053p46 | Kpol_178p2 | A7TN90 | A7TTN8 | Brix domain-containing protein. | Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. | 0.989 |
Kpol_1053p46 | Kpol_2001p32 | A7TN90 | A7TGR4 | Brix domain-containing protein. | Uncharacterized protein. | 0.999 |
Kpol_1053p46 | Kpol_316p5 | A7TN90 | A7TSP5 | Brix domain-containing protein. | Protein MAK16; Belongs to the MAK16 family. | 0.985 |
Kpol_1053p46 | Kpol_365p6 | A7TN90 | A7TS03 | Brix domain-containing protein. | Brix domain-containing protein. | 0.993 |
Kpol_1053p46 | Kpol_397p1 | A7TN90 | A7TRF3 | Brix domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.995 |
Kpol_1053p46 | NSA1 | A7TN90 | A7TJL1 | Brix domain-containing protein. | Ribosome biogenesis protein NSA1; Involved in the biogenesis of the 60S ribosomal subunit. | 0.978 |
Kpol_1053p46 | SPB1 | A7TN90 | A7TFD2 | Brix domain-containing protein. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.935 |
Kpol_1053p46 | YTM1 | A7TN90 | A7TMF9 | Brix domain-containing protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.992 |
page 1 of 6