Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Kpol_1020p20 | Kpol_1050p84 | A7TLD1 | A7TEX8 | RF_PROK_I domain-containing protein. | OBG-type G domain-containing protein. | 0.640 |
Kpol_1020p20 | Kpol_1059p22 | A7TLD1 | A7TN26 | RF_PROK_I domain-containing protein. | Eukaryotic translation initiation factor 5A. | 0.569 |
Kpol_1020p20 | Kpol_237p5 | A7TLD1 | A7TTK2 | RF_PROK_I domain-containing protein. | Uncharacterized protein. | 0.645 |
Kpol_1020p20 | NCS6 | A7TLD1 | A7TER7 | RF_PROK_I domain-containing protein. | Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | 0.418 |
Kpol_1020p20 | PET112 | A7TLD1 | A7TI41 | RF_PROK_I domain-containing protein. | Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). | 0.606 |
Kpol_1035p42 | Kpol_1059p22 | A7TKK7 | A7TN26 | B5 domain-containing protein. | Eukaryotic translation initiation factor 5A. | 0.656 |
Kpol_1035p42 | Kpol_237p5 | A7TKK7 | A7TTK2 | B5 domain-containing protein. | Uncharacterized protein. | 0.612 |
Kpol_1035p42 | Kpol_413p8 | A7TKK7 | A7TRH3 | B5 domain-containing protein. | Uncharacterized protein. | 0.815 |
Kpol_1035p42 | Kpol_543p62 | A7TKK7 | A7THR6 | B5 domain-containing protein. | Glutamine amidotransferase type-1 domain-containing protein. | 0.639 |
Kpol_1035p42 | PET112 | A7TKK7 | A7TI41 | B5 domain-containing protein. | Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). | 0.496 |
Kpol_1036p58 | Kpol_1050p84 | A7TEK6 | A7TEX8 | Uncharacterized protein. | OBG-type G domain-containing protein. | 0.532 |
Kpol_1036p58 | Kpol_1059p22 | A7TEK6 | A7TN26 | Uncharacterized protein. | Eukaryotic translation initiation factor 5A. | 0.569 |
Kpol_1036p58 | Kpol_237p5 | A7TEK6 | A7TTK2 | Uncharacterized protein. | Uncharacterized protein. | 0.645 |
Kpol_1036p58 | NCS6 | A7TEK6 | A7TER7 | Uncharacterized protein. | Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation. | 0.418 |
Kpol_1036p58 | PET112 | A7TEK6 | A7TI41 | Uncharacterized protein. | Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). | 0.606 |
Kpol_1050p84 | Kpol_1020p20 | A7TEX8 | A7TLD1 | OBG-type G domain-containing protein. | RF_PROK_I domain-containing protein. | 0.640 |
Kpol_1050p84 | Kpol_1036p58 | A7TEX8 | A7TEK6 | OBG-type G domain-containing protein. | Uncharacterized protein. | 0.532 |
Kpol_1050p84 | Kpol_237p5 | A7TEX8 | A7TTK2 | OBG-type G domain-containing protein. | Uncharacterized protein. | 0.667 |
Kpol_1050p84 | Kpol_264p9 | A7TEX8 | A7TSZ2 | OBG-type G domain-containing protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.484 |
Kpol_1050p84 | Kpol_413p8 | A7TEX8 | A7TRH3 | OBG-type G domain-containing protein. | Uncharacterized protein. | 0.493 |
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