STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109968972Coiled-coil domain containing 30. (1269 aa)    
Predicted Functional Partners:
setbp1
SET binding protein 1.
  
  0.435
LOC109963152
Proline rich 14.
  
 
  0.419
espl1
Extra spindle pole bodies like 1, separase.
  
 
 0.413
plk4
Polo-like kinase 4 (Drosophila).
   
 0.410
plk2
Serine/threonine-protein kinase PLK.
   
 0.410
plk3
Serine/threonine-protein kinase PLK.
   
 0.410
PLK1
Serine/threonine-protein kinase PLK.
   
 0.410
LOC109963568
Marker of proliferation Ki-67.
  
 
   0.409
LOC109961407
Family with sequence similarity 184 member B.
  
     0.406
cramp1
Cramped chromatin regulator homolog 1.
  
     0.406
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.