STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109954123Sine oculis binding protein homolog (Drosophila) b. (866 aa)    
Predicted Functional Partners:
sec63
SEC63 homolog, protein translocation regulator.
      
 0.692
LOC109972650
Cytochrome b5 reductase 4.
      
 0.593
cep162
Centrosomal protein 162.
      
 0.584
Rnf152
Ring finger protein 152.
      
 0.579
LOC109954459
Ripply transcriptional repressor 2.
      
 0.572
nt5e
5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family.
      
 0.557
CDH20
Cadherin 20; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.550
CDH6
Cadherin 6; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.548
CDH6-2
Cadherin 6; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.548
LOC109962141
T-box transcription factor 18.
      
 0.542
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.