STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr41WD repeat domain 41. (412 aa)    
Predicted Functional Partners:
c9orf72
Zgc:100846.
    
 
 0.965
LOC109952653
Smith-Magenis syndrome chromosome region, candidate 8a.
    
 
 0.895
LOC109973292
Smith-Magenis syndrome chromosome region, candidate 8b.
    
 
 0.895
cdk1
Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
   
 0.839
cdk2
Cyclin-dependent kinase 2; Belongs to the protein kinase superfamily.
   
 0.839
cdk4
Cyclin-dependent kinase 4; Belongs to the protein kinase superfamily.
   
 0.839
cdk6
Cyclin-dependent kinase 6; Belongs to the protein kinase superfamily.
   
 0.839
LOC109970656
Fizzy/cell division cycle 20 related 1b.
   
 0.834
LOC109967487
WD_REPEATS_REGION domain-containing protein.
   
 0.834
Intu
Inturned planar cell polarity protein.
   
 0.834
Your Current Organism:
Monopterus albus
NCBI taxonomy Id: 43700
Other names: Fluta alba, M. albus, Muraena alba, rice-field eel, swamp eel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.